Stem-loop mtr-MIR5205b

Accession

MI0018241

Description

Medicago truncatula mtr-MIR5205b precursor miRNA

Gene family

MIPF0000344; MIR818

Literature search

1 open access papers mention mtr-MIR5205b
(1 sentences)

Sequence

aaaaggguCUUAUAAUUAGGGACGGAGGGAGUacuucaaaagauacugaaguacucauuacuacccuacuuuaaaagauacccaa
....(((((((.(((.(((((..(....((((((((((........))))))))))....)..)))))..))).))))..)))..

Structure

aaaa   --    A   -U     AC GAGG          aaa 
    ggg  uCUU UAA  UAGGG  G    GAGUacuuca   g
    |||  |||| |||  |||||  |    ||||||||||    
    ccc  agaa auu  auccc  c    cucaugaagu   a
--aa   au    a   uc     au auua          cau 

Annotation confidence Not enough data

Genome context

chr3: 8930370-8930454 [-]

Mature mtr-miR5205b

• Accession: MIMAT0021134
• Description: Medicago truncatula mtr-miR5205b mature miRNA
• Sequence: 9 - CUUAUAAUUAGGGACGGAGGGAGU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010