Stem-loop mtr-MIR5229b

Accession

MI0018319

Description

Medicago truncatula mtr-MIR5229b precursor miRNA

Gene family

MIPF0001323; MIR5229

Sequence

cuuuuuuuguUUAGCAGGAAGAGUGACUAUGgaggcugacaaaaggguuggucacguuagucacucuuccuguuaaccaaugaaauaag
.((((.(((.(((((((((((((((((((..(.(((((((......))))))).)..))))))))))))))))))).))).))))....

Structure

---c    u   u                   UG a       aa 
    uuuu uug UUAGCAGGAAGAGUGACUA  g ggcugac  a
    |||| ||| |||||||||||||||||||  | |||||||   
    aaag aac aauuguccuucucacugau  c cugguug  a
gaau    u   c                   ug a       gg 

Annotation confidence Not enough data

Genome context

chr5: 11293234-11293322 [+]

Mature mtr-miR5229b

• Accession: MIMAT0021214
• Description: Medicago truncatula mtr-miR5229b mature miRNA
• Sequence: 11 - UUAGCAGGAAGAGUGACUAUG - 31
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010


2. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553