Stem-loop sequence gma-MIR397b

Accession MI0018646
Description Glycine max miR397b stem-loop
Gene family MIPF0000120; MIR397
Stem-loop 
g         c              ug      u  uaaauaguaaau    a     ccucgu 
 gagaaacau auugagugcagcgu  augaag cc            agca cuacc      g
 ||||||||| ||||||||||||||  |||||| ||            |||| |||||       
 uuuuuugua uaacucacgucgca  uauuuu gg            ucgu gaugg      u
u         c              gu      -  -------uaaau    a     acucuu
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Genome context
Coordinates (Phytozome5.0) Overlapping transcripts
Gm13: 34382999-34383120 [-]
intergenic

Mature sequence gma-miR397b-5p

Accession MIMAT0021628
Previous IDs gma-miR397b
Sequence

10 -  

ucauugagugcagcguugaug

 - 30

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Evidence experimental; Solexa [1-2]

Mature sequence gma-miR397b-3p

Accession MIMAT0022991
Sequence

93 -  

uauugacgcugcacucaauca

 - 113

Get sequence
Evidence experimental; Solexa [2]

References

1
PMID:21663675 "Identification of novel soybean microRNAs involved in abiotic and biotic stresses" Kulcheski FR, de Oliveira LF, Molina LG, Almerao MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimaraes FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R BMC Genomics. 12:307(2011).
2
PMID:22156213 "MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs" Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC Genes Dev. 25:2540-2553(2011).