miRBase entry: gma-MIR3522

Stem-loop gma-MIR3522


Accession
MI0018650
Description
Glycine max gma-MIR3522 precursor miRNA
Gene family
MIPF0000936; MIR3522

Literature search
10 open access papers mention gma-MIR3522
(33 sentences)

Sequence

aggaucguccugAGACCAAAUGAGCAGCUGAccacaugaugcagcuauguuugcuauucagcugcucaucuguucucaggucgcccu
(((..((.(((((((.((.((((((((((((.........(((....))).......)))))))))))).)).))))))).)).)))

Structure
   au  u       C  A            ccacaugau   g 
agg  cg ccugAGA CA AUGAGCAGCUGA         gca c
|||  || ||||||| || ||||||||||||         |||  
ucc  gc ggacucu gu uacucgucgacu         ugu u
   -c  u       u  c            --uaucguu   a 


Annotation confidence Not enough data
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Genome context
chr15: 4337688-4337774 [+]

Database links

Mature gma-miR3522

Accession MIMAT0021633
Description Glycine max gma-miR3522 mature miRNA
Sequence 13 - AGACCAAAUGAGCAGCUGA - 31
Evidence experimental
Illumina [1-3]

References

  1. PubMed ID: 21663675
    Identification of novel soybean microRNAs involved in abiotic and biotic stresses
    Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
    BMC Genomics (2011) 12:307

  2. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553

  3. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153