Accession
MI0019041
Description
Oryza sativa
osa-MIR5522 precursor miRNA
Sequence
3002
reads,
16.0
reads per million, 122 experiments
agcaccuaagAACAAUAGGAAUGGGAGGCAUuaggaaaguugcaagccaagucuccacaaacauggagcuugcacUUUCCUCCAUGUUCCCAUuccuacagcucuuagacccu
.....((((((.(..((((((((((((.(((.((((((((.((((((......((((......))))))))))))))))))..)))))))))))))))..).)))))).....
.....((((((.(..((((((((((((.(((.((((((((.((((((......((((......))))))))))))))))))..)))))))))))))))..).)))))).....
Structure
agcac A AA G -u u caaguc ca
cuaagA C UAGGAAUGGGAG CAU aggaaagu gcaagc ucca a
|||||| | |||||||||||| ||| |||||||| |||||| ||||
gauucu g auccuUACCCUU GUA UCCUUUca cguucg aggu a
uccca c ac - CC - ------ ac
Annotation confidence
Low
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Genome context
4: 21650324-21650436 [+]
Clustered miRNAs
14 other miRNAs are < 10 kb from osa-MIR5522
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR5522-5p
| Accession | MIMAT0022156 |
| Description | Oryza sativa osa-miR5522-5p mature miRNA |
| Sequence | 11 - AACAAUAGGAAUGGGAGGCAU - 31 |
| Evidence |
experimental
Illumina [1] |
| Database links |
|
Mature osa-miR5522-3p
| Accession | MIMAT0056234 |
| Description | Oryza sativa osa-miR5522-3p mature miRNA |
| Sequence | 76 - UUUCCUCCAUGUUCCCAU - 93 |
| Evidence |
experimental
unknown |
References
|
