Accession
MI0019060
Description
Oryza sativa
osa-MIR5539a precursor miRNA
Gene family
MIPF0001733;
MIR5539
Sequence
6
reads,
6
reads per million, 2 experiments
gauucaaagcAAGAAAACGGAUGCGCGUGCUAacgcuuucgcgcuagugcgcucaauccguugcuuguuuggaaca
..(((.(((((((..((((((((.((((((((.(((....))).)))))))).).))))))).))))))).)))..
..(((.(((((((..((((((((.((((((((.(((....))).)))))))).).))))))).))))))).)))..
Structure
ga a AA - C a u uuc aagcAAG AACGGAU G GCGUGCUA cgc u ||| ||||||| ||||||| | |||||||| ||| aag uuuguuc uugccua c cgcgugau gcg u ac g -g a u c c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr12: 20548894-20548969 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from osa-MIR5539a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR5539a
| Accession | MIMAT0022175 |
| Description | Oryza sativa osa-miR5539a mature miRNA |
| Sequence | 11 - AAGAAAACGGAUGCGCGUGCUA - 32 |
| Evidence |
experimental
Illumina [1] |
| Database links |
|
References
|
