Stem-loop ath-MIR5630a

Accession

MI0019201

Description

Arabidopsis thaliana ath-MIR5630a precursor miRNA

Gene family

MIPF0001332; MIR5630

Sequence

cgugGCUAAGAGCGGUUCUGAUGGAggcgcugguuuugcguguuccaaaccacgaaucgaucuuaagcuucu
.(.((((((((.((((((((.((((.((((.......))))..))))...)).)))))).)))).)))).).

Structure

c u    -    G      -  --A    -g    ug 
 g gGCU AAGA CGGUUC UG   UGGA  gcgc  g
 | |||| |||| |||||| ||   ||||  ||||  u
 c ucga uucu gcuaag ac   accu  ugcg  u
u u    a    a      c  caa    ug    uu 

Annotation confidence Not enough data

Genome context

chr1: 12011152-12011223 [-]

Mature ath-miR5630a

• Accession: MIMAT0022389
• Description: Arabidopsis thaliana ath-miR5630a mature miRNA
• Sequence: 5 - GCUAAGAGCGGUUCUGAUGGA - 25
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21940835
   High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
   "Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN"
   "Genome Res (2012) 22:163-176