Stem-loop sequence sha-mir-128

AccessionMI0019625
DescriptionSarcophilus harrisii miR-128 stem-loop
Gene family MIPF0000048; mir-128
Stem-loop
   uugucauuuaaccauguuuguuuaauaucauggaauaauu    uuauuu ug   u      uuc       uag      cu       u 
5'                                         ggcc      g  agc guugga   ggggccg   cacugu  gagaggu u
                                           ||||      |  ||| ||||||   |||||||   ||||||  |||||||  
3'                                         ucgg      c  ucg cgacuu   cucuggc   gugaca  cucuuua a
   -----------------------------cucauuuuucu    -----u cu   u      uuu       caa      --       c 
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Confidence
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Genome context
Coordinates (DEVIL7_0) Overlapping transcripts
GL849609.1: 2503876-2504025 [+]
sense
ENSSHAT00000020198 ; R3HDM1-202; intron 15
ENSSHAT00000020197 ; R3HDM1-201; intron 17

Mature sequence sha-miR-128

Accession MIMAT0022798
Sequence

101 - 

ucacagugaaccggucucuuu

 - 121

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Evidence experimental; Illumina [1]

References

1
PMID:20044575 "The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer" Murchison EP, Tovar C, Hsu A, Bender HS, Kheradpour P, Rebbeck CA, Obendorf D, Conlan C, Bahlo M, Blizzard CA, Pyecroft S, Kreiss A, Kellis M, Stark A, Harkins TT, Marshall Graves JA, Woods GM, Hannon GJ, Papenfuss AT Science. 327:84-87(2010).