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The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer |
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|---|---|
| PubMed ID | 20044575 |
| Authors | "Murchison EP, Tovar C, Hsu A, Bender HS, Kheradpour P, Rebbeck CA, Obendorf D, Conlan C, Bahlo M, Blizzard CA, Pyecroft S, Kreiss A, Kellis M, Stark A, Harkins TT, Marshall Graves JA, Woods GM, Hannon GJ, Papenfuss AT" |
| Journal | "Science |
| Volume | 327 |
| Pages | 84-87 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| sha-mir-190 | MI0019595 | None | GL834484.1 | 2121690 | 2121839 | + | - |
| sha-mir-181a-2 | MI0019596 | None | GL834637.1 | 2485835 | 2485944 | + | - |
| sha-mir-138-1 | MI0019597 | None | GL834650.1 | 1024447 | 1024596 | + | - |
| sha-mir-352 | MI0019598 | None | GL834659.1 | 2574240 | 2574389 | + | - |
| sha-mir-1329 | MI0019599 | None | GL834685.1 | 638211 | 638360 | - | - |
| sha-mir-340 | MI0019601 | None | GL834730.1 | 741012 | 741161 | + | - |
| sha-mir-216b | MI0019602 | None | GL834734.1 | 1003764 | 1003913 | + | - |
| sha-mir-216a | MI0019603 | None | GL834734.1 | 1019942 | 1020091 | + | - |
| sha-mir-140 | MI0019604 | None | GL834769.1 | 1909500 | 1909649 | + | - |
| sha-mir-126 | MI0019605 | None | GL834949.1 | 4222 | 4371 | + | - |
| sha-mir-202 | MI0019606 | None | GL835536.1 | 120399 | 120548 | + | - |
| sha-mir-1540 | MI0019607 | None | GL836570.1 | 10620 | 10769 | + | - |
| sha-mir-9 | MI0019609 | None | GL841279.1 | 926517 | 926666 | + | - |
| sha-mir-133a | MI0019610 | None | GL841304.1 | 692704 | 692853 | + | - |
| sha-mir-199a | MI0019611 | None | GL841403.1 | 248906 | 249055 | + | - |
| sha-mir-23a | MI0019612 | None | GL841415.1 | 820911 | 821060 | + | - |
| sha-mir-24-2 | MI0019613 | None | GL841415.1 | 821238 | 821387 | + | - |
| sha-mir-23b | MI0019614 | None | GL841474.1 | 1159813 | 1159962 | + | - |
| sha-mir-27b | MI0019615 | None | GL841474.1 | 1160030 | 1160179 | + | - |
| sha-mir-24-1 | MI0019616 | None | GL841474.1 | 1160603 | 1160752 | + | - |
| sha-mir-204 | MI0019617 | None | GL841514.1 | 388049 | 388198 | + | - |
| sha-mir-193 | MI0019619 | None | GL841527.1 | 136479 | 136628 | + | - |
| sha-mir-7 | MI0019620 | None | GL841540.1 | 2528669 | 2528818 | + | - |
| sha-let-7g | MI0019621 | None | GL841618.1 | 10114 | 10263 | + | - |
| sha-mir-1546 | MI0019622 | None | GL842385.1 | 61284 | 61433 | + | - |
| sha-mir-222 | MI0019623 | None | GL849540.1 | 1793800 | 1793949 | + | - |
| sha-mir-221 | MI0019624 | None | GL849540.1 | 1794391 | 1794540 | + | - |
| sha-mir-128 | MI0019625 | None | GL849609.1 | 2503876 | 2504025 | + | - |
| sha-mir-10b | MI0019626 | None | GL849635.1 | 2022341 | 2022490 | + | - |
| sha-mir-100 | MI0019627 | None | GL849656.1 | 1017612 | 1017761 | + | - |
| sha-let-7a | MI0019628 | None | GL849656.1 | 1022775 | 1022924 | + | - |
| sha-mir-125a | MI0019629 | None | GL849656.1 | 1066094 | 1066243 | + | - |
| sha-mir-139 | MI0019630 | None | GL849732.1 | 511066 | 511215 | + | - |
| sha-mir-200b | MI0019631 | None | GL849763.1 | 160073 | 160222 | + | - |
| sha-mir-200a | MI0019632 | None | GL849763.1 | 162393 | 162542 | + | - |
| sha-mir-150 | MI0019633 | None | GL849778.1 | 132881 | 133030 | + | - |
| sha-mir-30e | MI0019634 | None | GL849784.1 | 535960 | 536109 | + | - |
| sha-mir-30c | MI0019635 | None | GL849784.1 | 539136 | 539285 | + | - |
| sha-mir-19b | MI0019636 | None | GL849858.1 | 3486496 | 3486645 | - | - |
| sha-mir-125b | MI0019637 | None | GL850548.1 | 23475 | 23624 | + | - |
| sha-mir-101 | MI0019638 | None | GL856736.1 | 1265417 | 1265566 | + | - |
| sha-mir-181a-1 | MI0019639 | None | GL856772.1 | 2114846 | 2114943 | - | - |
| sha-mir-205 | MI0019640 | None | GL856783.1 | 365799 | 365948 | + | - |
| sha-mir-21 | MI0019641 | None | GL856812.1 | 2094225 | 2094374 | - | - |
| sha-mir-130b | MI0019642 | None | GL856812.1 | 2852938 | 2853087 | + | - |
| sha-mir-454 | MI0019643 | None | GL856812.1 | 2872454 | 2872603 | + | - |
| sha-mir-142 | MI0019644 | None | GL856813.1 | 835351 | 835500 | + | - |
| sha-mir-10a | MI0019645 | None | GL856828.1 | 1035029 | 1035178 | - | - |
| sha-mir-338 | MI0019646 | None | GL856847.1 | 53405 | 53554 | + | - |
| sha-mir-93 | MI0019647 | None | GL856864.1 | 887817 | 887966 | + | - |
| sha-mir-25 | MI0019648 | None | GL856864.1 | 888073 | 888222 | + | - |
| sha-mir-497 | MI0019649 | None | GL858641.1 | 5112 | 5261 | + | - |
| sha-let-7i | MI0019650 | None | GL861550.1 | 1519507 | 1519656 | + | - |
| sha-mir-135a | MI0019651 | None | GL861598.1 | 2879559 | 2879708 | + | - |
| sha-mir-1549 | MI0019652 | None | GL861612.1 | 2123585 | 2123734 | + | - |
| sha-mir-200c | MI0019653 | None | GL861612.1 | 2158021 | 2158170 | + | - |
| sha-mir-141 | MI0019654 | None | GL861612.1 | 2158436 | 2158585 | + | - |
| sha-mir-129 | MI0019655 | None | GL861653.1 | 2316521 | 2316670 | + | - |
| sha-mir-138-2 | MI0019656 | None | GL861705.1 | 3033995 | 3034144 | - | - |
| sha-mir-26a | MI0019657 | None | GL861726.1 | 614962 | 615111 | - | - |
| sha-mir-383 | MI0019658 | None | GL864737.1 | 2362136 | 2362285 | + | - |
| sha-mir-130a | MI0019659 | None | GL864900.1 | 1865338 | 1865487 | + | - |
| sha-mir-363 | MI0019660 | None | GL867596.1 | 70409 | 70558 | - | - |
| sha-mir-92a | MI0019661 | None | None | None | - | ||
| sha-mir-5105 | MI0019608 | None | None | None | - | ||
| sha-mir-716a | MI0019600 | None | None | None | - | ||
| sha-mir-716b | MI0019618 | None | None | None | - |