Stem-loop sequence sha-mir-125b

Accession MI0019637
Description Sarcophilus harrisii miR-125b stem-loop
Gene family MIPF0000017; mir-125
Stem-loop 
uccaaaauauccguacuauagaagaaagaauucuacugcaucaaauaaga   uu     uc  ug   c   a        gauuuuu 
                                                  cuu  ccuag  cc  aga ccu acuuguga       u
                                                  |||  |||||  ||  ||| ||| ||||||||        
                                                  gag  ggauc  gg  ucu gga uggacacu       a
------------------------------caggucucgacgaccaaggg   gc     ca  gu   c   c        aauaacg
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Genome context
Coordinates (DEVIL7_0) Overlapping transcripts
GL850548.1: 23475-23624 [+]
intergenic

Mature sequence sha-miR-125b

Accession MIMAT0022810
Sequence

101 -  

acaggucaggcucuugggacc

 - 121

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Evidence experimental; Solexa [1]

References

1
PMID:20044575 "The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer" Murchison EP, Tovar C, Hsu A, Bender HS, Kheradpour P, Rebbeck CA, Obendorf D, Conlan C, Bahlo M, Blizzard CA, Pyecroft S, Kreiss A, Kellis M, Stark A, Harkins TT, Marshall Graves JA, Woods GM, Hannon GJ, Papenfuss AT Science. 327:84-87(2010).