Stem-loop sha-mir-363

Accession

MI0019660

Description

Sarcophilus harrisii sha-mir-363 precursor miRNA

Gene family

MIPF0000138; mir-363

Sequence

aguuccugucaggaucgaaaaggggccgagcUGGCUGGUUUGCUGUUGUCggguggaucacgaugcaauuuugauaaguuuaguaggagaaaaauugcacgguauccaucuguaaaccgcaagaccuuuugcaguggcagcuuggggugg
.((((((.((......))..))))))(((((((.(.(((((((.(((..(((((((((..((.(((((((((..................)))))))))))..)))))))))..))).)).))))).........).)))))))......

Structure

aguuccugucaggaucgaaaaggggc       G --------U     -  U   GU         ca  a         gauaaguu 
                          cgagcUG C         GGUUU GC GUU  Cggguggau  cg ugcaauuuu        u
                          ||||||| |         ||||| || |||  |||||||||  || |||||||||         
                          guucgac g         ccaga cg caa  gucuaccua  gc acguuaaaa        a
--------------------gguggg       g ugacguuuu     a  c   au         ug  -         agaggaug 

Annotation confidence Not enough data

Genome context

GL867596.1: 70409-70558 [-]

Mature sha-miR-363

• Accession: MIMAT0022831
• Description: Sarcophilus harrisii sha-miR-363 mature miRNA
• Sequence: 32 - UGGCUGGUUUGCUGUUGUC - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20044575
   The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer
   "Murchison EP, Tovar C, Hsu A, Bender HS, Kheradpour P, Rebbeck CA, Obendorf D, Conlan C, Bahlo M, Blizzard CA, Pyecroft S, Kreiss A, Kellis M, Stark A, Harkins TT, Marshall Graves JA, Woods GM, Hannon GJ, Papenfuss AT"
   "Science (2010) 327:84-87