Stem-loop gma-MIR5761a

Accession

MI0019702

Description

Glycine max gma-MIR5761a precursor miRNA

Literature search

1 open access papers mention gma-MIR5761a
(1 sentences)

Sequence

gauuggaagcaugagcuucaaaaccaagagguuguuuagagauugccuucacaacaaauuuucuauugcauucuugauauguagacccuccucugaugcauuuguaaugaugauccaaacuugguuguuggaaccucaaaacauuauguucuauuugaguuucccUUUUGUGUCGUGAAGCUUUUGauauccaaga
..(((((.(((.((((((((..(((((((((((((..((.......))..)))))...........(((((.......)))))((((.......(((.((((......))))))).......))))...((((.(((((((((...)))....)))))).)))))))))).))..)))))))).)).).)))))..

Structure

ga     a -  u        aa  -      guuguuuagagauugccuucacaacaaauuuucuauugcauucuugauauguagacccuccucugaugcauuuguaaugaugauccaaacuugguuguu    c      ----   u 
  uugga g ca gagcuuca  ac caagag                                                                                                   ggaa cucaaa    aca  
  ||||| | || ||||||||  || ||||||                                                                                                   |||| ||||||    ||| u
  aaccu u GU UUCGAAGU  UG GUUUUc                                                                                                   ccuu gaguuu    ugu  
ag     a a  U        GC  U      ---------------------------------------------------------------------------------------------------    u      aucu   a 

Annotation confidence Low

Genome context

chr10: 51252115-51252310 [-]

Mature gma-miR5761a

• Accession: MIMAT0023157
• Description: Glycine max gma-miR5761a mature miRNA
• Sequence: 166 - UUUUGUGUCGUGAAGCUUUUG - 186
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553