Stem-loop gma-MIR5774b

Accession

MI0019738

Description

Glycine max gma-MIR5774b precursor miRNA

Gene family

MIPF0001567; MIR5774

Literature search

1 open access papers mention gma-MIR5774b
(2 sentences)

Sequence

aagaguuuggGCUGGCGUCGACACGUGGCAUgagacuagucaguggcaauuugcagguagcagggcuucucagcuuuuucaggguagcaggguuacugcaaaucgccaauuggacuggcuagucucaugucacgugucgacgucagcccaaacucgu
..(((((((((((((((((((((((((((((((((((((((((((((.((((((((.((((...(((.(((..........))).)))...)))))))))))).)))......))))))))))))))))))))))))))))))))))))))))))..

Structure

aa                                          ------   a        g    agg   u   agcu 
  gaguuuggGCUGGCGUCGACACGUGGCAUgagacuagucagu      ggc auuugcag uagc   gcu cuc    u
  ||||||||||||||||||||||||||||||||||||||||||      ||| |||||||| ||||   ||| |||     
  cucaaacccgacugcagcugugcacuguacucugaucgguca      ccg uaaacguc auug   cga ggg    u
ug                                          gguuaa   c        -    gga   u   acuu 

Annotation confidence Not enough data

Genome context

chr9: 49753426-49753582 [-]

Mature gma-miR5774b

• Accession: MIMAT0023193
• Description: Glycine max gma-miR5774b mature miRNA
• Sequence: 11 - GCUGGCGUCGACACGUGGCAU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553