Stem-loop sequence gma-MIR171n

AccessionMI0019747 (change log)
DescriptionGlycine max miR171n stem-loop
Gene family MIPF0000030; MIR171_1
Literature search

16 open access papers mention gma-MIR171n
(37 sentences)

Stem-loop 
   -auacgaauuagcacau  -    u               c       ugaa    u    auuaug 
5'                  ga caaa uaagguauuggcgug cucaauu    uaca ggcu      a
                    || |||| ||||||||||||||| |||||||    |||| ||||       
3'                  cu guuu auucuauaacugcgc gaguuag    augu ccga      c
   auccucuaccuuuucuu  c    u               c       uuug    u    ccuaaa
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Glycine_max_v2.0; GCA_000004515.3) Overlapping transcripts
chr12: 35463985-35464118 [+]
intergenic
Database links

Mature sequence gma-miR171n

Accession MIMAT0023202
Sequence

89 -  

uugagccgcgucaauaucuua

 - 109

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:22156213 "MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs" Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC Genes Dev. 25:2540-2553(2011).