miRBase entry: gma-MIR2111e

Stem-loop gma-MIR2111e


Accession
MI0019782
Description
Glycine max gma-MIR2111e precursor miRNA
Gene family
MIPF0000754; MIR2111

Literature search
5 open access papers mention gma-MIR2111e
(28 sentences)

Sequence

uaggaucaggUAAUCUGCAUCCUGAGGUUUAgaaacaauauguuuauauaucggggguaauccuugggauguagauuaccacuuccuu
.((((...(((((((((((((((((((.(((....(.(((((....))))).)....))).)))))))))))))))))))...)))).

Structure
u    uca                   U   gaaa a     u 
 agga   ggUAAUCUGCAUCCUGAGG UUA    c auaug u
 ||||   ||||||||||||||||||| |||    | |||||  
 uccu   ccauuagauguaggguucc aau    g uauau u
u    uca                   u   gggg c     a 


Annotation confidence Not enough data
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Genome context
chr7: 16470310-16470397 [-]

Database links

Mature gma-miR2111e

Accession MIMAT0023237
Description Glycine max gma-miR2111e mature miRNA
Sequence 11 - UAAUCUGCAUCCUGAGGUUUA - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553