Dead hairpin entry

Stem-loop osa-MIR812r

Accession

MI0019807

Description

Oryza sativa osa-MIR812r precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

10 open access papers mention osa-MIR812r
(16 sentences)

Sequence

455362 reads, 1781.0 reads per million, 142 experiments

ccuaaaauaaguauaguuuugcacuguucaugucuaacGUUUGACCGUUCGUCUUAUUUGAAaauuuuuuaugauuaauauuuuuguuguuauuagauaauaaaacaugaauaguauuuuaugugugacuaacuuuuuuuaauuuucuuauaaauuuuuuAAAUAAGACGGACGGUCAAACGUUagacacgaauuucuacggcugcacuuauuuuagg
((((((((((((.(((((.......((((.((((((((((((((((((((((((((((((((((...(((((((........(((((((((....)))))))))(((((((......)))))))((.....))..............))))))).)))))))))))))))))))))))))))))))))).))))......))))).))))))))))))

Structure

            a     uugcacu    a                                  uuu       -----------------------------------uuaauauu         a 
ccuaaaauaagu uaguu       guuc ugucuaacGUUUGACCGUUCGUCUUAUUUGAAaa   uuuauga                                           uuuguuguu u
|||||||||||| |||||       |||| ||||||||||||||||||||||||||||||||||   |||||||                                           |||||||||  
ggauuuuauuca gucgg       uaag acagaUUGCAAACUGGCAGGCAGAAUAAAuuuuu   aaauauu                                           aaauaauag u
            c     -caucuu    c                                  --u       cuuuuaauuuuuuucaaucaguguguauuuuaugauaaguaca         a