Stem-loop sequence hco-mir-5885a

Accession

MI0019995 (change log)

Description

Haemonchus contortus miR-5885a stem-loop

Gene family

MIPF0001404; mir-5885

Literature search

1 open access papers mention hco-mir-5885a
(2 sentences)

Stem-loop

   ----gcgcucggucggcaccgauaaca           g      g         
5'                            ggguguacgug uggucu guaagugu 
                              ||||||||||| |||||| ||||||| g
3'                            cuuauaugcgc acuaga uauucgcu 
   gcagcuguccgcagcuugaacgcgccg           -      g         

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Database links

• miRBase Tracker:MI0019995

Mature sequence hco-miR-5885a

• Accession: MIMAT0023319
• Sequence: 59 - ugagaucacgcguauauucgc - 79
• Evidence: experimental; Illumina [1]

References

1. PMID:22216965 "Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel" Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C BMC Genomics. 13:4(2012).