Stem-loop hco-mir-5911b

Accession

MI0020058

Description

Haemonchus contortus hco-mir-5911b precursor miRNA

Gene family

MIPF0001407; mir-5911

Sequence

gaggguguugUAAGGUUGACUUGCUUAGAAGCUuguuuauucuucuaagcucuucacucuuauagacaccuuca
(((((((((((((((.(((...(((((((((..........)))))))))...))).))))))).)))))))).

Structure

-        -       U   CUU         CUug 
 gagggugu ugUAAGG UGA   GCUUAGAAG    u
 |||||||| ||||||| |||   |||||||||     
 cuuccaca auauucu acu   cgaaucuuc    u
a        g       c   ucu         uuau 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5911b

• Accession: MIMAT0023386
• Description: Haemonchus contortus hco-miR-5911b mature miRNA
• Sequence: 11 - UAAGGUUGACUUGCUUAGAAGCU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4