Stem-loop hco-mir-5984a

Accession

MI0020162

Description

Haemonchus contortus hco-mir-5984a precursor miRNA

Gene family

MIPF0001468; mir-5984

Sequence

accgaauauuuuggccaucauaaaaccgucuaaagaguacgcuucuaugcauagaaGUGUACUCUUUAGACGGUUCUAugaugauuuuuauaccuucuugc
.(((((...))))).(((((((.((((((((((((((((((((((((....)))))))))))))))))))))))).)))))))..................

Structure

---accgaauauuuuggc       a                        u 
                  caucaua aaccgucuaaagaguacgcuucua g
                  ||||||| ||||||||||||||||||||||||  
                  guaguAU UUGGCAGAUUUCUCAUGUGaagau c
cguucuuccauauuuuua       C                        a 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5984a

• Accession: MIMAT0023494
• Description: Haemonchus contortus hco-miR-5984a mature miRNA
• Sequence: 57 - GUGUACUCUUUAGACGGUUCUA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4