Stem-loop spu-mir-5992-1

Accession

MI0020185

Description

Strongylocentrotus purpuratus spu-mir-5992-1 precursor miRNA

Gene family

MIPF0002101; mir-5992

Sequence

CUGCAUUAUUGUAGAGCGCUUAGAGACaucugacaaaguaaguguuaggcgcuauauaagcacug
.(((....(((((.(((((((((......((.....))......))))))))).))))))))...

Structure

--C   AUUA     G         AGACau  g 
   UGC    UUGUA AGCGCUUAG      cu a
   |||    ||||| |||||||||      || c
   acg    aauau ucgcggauu      ga a
guc   ----     a         gugaau  a 

Annotation confidence Not enough data

Genome context

KN917381.1: 118405-118469 [+]

Mature spu-miR-5992

• Accession: MIMAT0023514
• Description: Strongylocentrotus purpuratus spu-miR-5992 mature miRNA
• Sequence: 1 - CUGCAUUAUUGUAGAGCGCUUAGAGAC - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216218
   RNA deep sequencing reveals differential microRNA expression during development of sea urchin and sea star
   Kadri S, Hinman VF, Benos PV
   PLoS One (2011) 6:e29217