Stem-loop bta-mir-2285o-1

Accession

MI0022270

Description

Bos taurus bta-mir-2285o-1 precursor miRNA

Literature search

11 open access papers mention bta-mir-2285o-1
(15 sentences)

Sequence

2146344 reads, 386.0 reads per million, 308 experiments

auaggauuggccaaagAGUUCAUUUGGGUUUUUCUagugagcuguaaacaAAAAACCCGAACGAACUUUUggcugacucaau
....((((((((((.((((((.(((((((((((...((.........)).))))))))))).)))))))))))))).))...

Structure

auag  -        a      A           CUa  gag 
    ga uuggccaa gAGUUC UUUGGGUUUUU   gu   c
    || |||||||| |||||| |||||||||||   ||   u
    cu agucggUU UUCAAG AAGCCCAAAAA   ca   g
-uaa  c        -      C           --a  aau 

Annotation confidence Medium

Genome context

12: 16484898-16484979 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2285o-1

Mature bta-miR-2285o-1-5p

• Accession: MIMAT0050983
• Description: Bos taurus bta-miR-2285o-1-5p mature miRNA
• Sequence: 17 - AGUUCAUUUGGGUUUUUCU - 35
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285o-1-3p

• Accession: MIMAT0025530
• Description: Bos taurus bta-miR-2285o-1-3p mature miRNA
• Sequence: 51 - AAAAACCCGAACGAACUUUU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026