miRBase entry: bta-mir-376e

Stem-loop bta-mir-376e


Accession
MI0022290
Description
Bos taurus bta-mir-376e precursor miRNA
Gene family
MIPF0000091; mir-368

Literature search
1 open access papers mention bta-mir-376e
(1 sentences)

Sequence

506 reads, 15 reads per million, 61 experiments
ugauauucaaaagguggauauuccuucuauguuuacaggauugacagcuaAACAUAGAGGAAAAUCCACAUUuuaaguaucu
.((((((.((((.((((((.(((((.((((((((((.(......).).)))))))))))))).)))))).)))).)))))).

Structure
u      c    g      a     u         - a ga 
 gauauu aaaa guggau uuccu cuauguuua c g  u
 |||||| |||| |||||| ||||| ||||||||| | |   
 cuauga uuUU CACCUA AAGGA GAUACAAau g c  u
u      a    A      A     -         c a ag 


Annotation confidence High
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Genome context
chr21: 67856314-67856395 [+]
Clustered miRNAs
17 other miRNAs are < 10 kb from bta-mir-376e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-376e

Accession MIMAT0025543
Description Bos taurus bta-miR-376e mature miRNA
Sequence 51 - AACAUAGAGGAAAAUCCACAUU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026