Stem-loop bta-mir-3957

Accession

MI0022294

Description

Bos taurus bta-mir-3957 precursor miRNA

Gene family

MIPF0001605; mir-3957

Literature search

1 open access papers mention bta-mir-3957
(1 sentences)

Sequence

168 reads, 13 reads per million, 48 experiments

uuggugggagCUCGGAGAGUGCAGCUGUGGgugucagggucaggcacacgcacagcaccucacugagcuccuuccaa
.(((.((((((((((.(((.(..((((((.(((((........).)))).)))))).)))).)))))))))).))).

Structure

u   u          A   U CA      G    - agg 
 ugg gggagCUCGG GAG G  GCUGUG gugu c   g
 ||| |||||||||| ||| |  |||||| |||| |    
 acc uccucgaguc cuc c  cgacac caca g   u
a   u          a   - -a      g    c gac 

Annotation confidence Not enough data

Genome context

chr21: 67881103-67881179 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from bta-mir-3957

Mature bta-miR-3957

• Accession: MIMAT0025548
• Description: Bos taurus bta-miR-3957 mature miRNA
• Sequence: 11 - CUCGGAGAGUGCAGCUGUGG - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026