Stem-loop bta-mir-1247

Accession

MI0022295

Description

Bos taurus bta-mir-1247 precursor miRNA

Gene family

MIPF0000669; mir-1247

Literature search

3 open access papers mention bta-mir-1247
(4 sentences)

Sequence

250 reads, 10 reads per million, 45 experiments

cgccgggcgcACCCGUCCCGUGCGUCCCCGGAcgucgcugucugcccCGGGAACGUCGGGACUGGAGCgcccgcgcug
.(((((((((.((.((((((.((((.(((((.....((.....)).))))).)))))))))).)).))))))).))..

Structure

-c  -       A  C      U    C     Acguc  u 
  gc cgggcgc CC GUCCCG GCGU CCCGG     gc g
  || ||||||| || |||||| |||| |||||     || u
  cg gcccgCG GG CAGGGC UGCA GGGCc     cg c
gu  c       A  U      -    A     ----c  u 

Annotation confidence Not enough data

Genome context

chr21: 68426259-68426336 [-]

Mature bta-miR-1247-5p

• Accession: MIMAT0025549
• Description: Bos taurus bta-miR-1247-5p mature miRNA
• Sequence: 11 - ACCCGUCCCGUGCGUCCCCGGA - 32
• Evidence: experimental ; Illumina [1]

Mature bta-miR-1247-3p

• Accession: MIMAT0025550
• Description: Bos taurus bta-miR-1247-3p mature miRNA
• Sequence: 48 - CGGGAACGUCGGGACUGGAGC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026