Stem-loop bta-mir-1247

Accession

MI0022295

Description

Bos taurus bta-mir-1247 precursor miRNA

Literature search

11 open access papers mention bta-mir-1247
(83 sentences)

Sequence

8940 reads, 8.0 reads per million, 255 experiments

cgccgggcgcACCCGUCCCGUGCGUCCCCGGAcgucgcugucugcccCGGGAACGUCGGGACUGGAGCgcccgcgcug
.(((((((((.((.((((((.((((.(((((.....((.....)).))))).)))))))))).)).))))))).))..

Structure

-c  -       A  C      U    C     Acguc  u 
  gc cgggcgc CC GUCCCG GCGU CCCGG     gc g
  || ||||||| || |||||| |||| |||||     || u
  cg gcccgCG GG CAGGGC UGCA GGGCc     cg c
gu  c       A  U      -    A     ----c  u 

Annotation confidence High

Genome context

21: 66493367-66493444 [-]

Mature bta-miR-1247-5p

• Accession: MIMAT0025549
• Description: Bos taurus bta-miR-1247-5p mature miRNA
• Sequence: 11 - ACCCGUCCCGUGCGUCCCCGGA - 32
• Evidence: experimental ; Illumina [1]

Mature bta-miR-1247-3p

• Accession: MIMAT0025550
• Description: Bos taurus bta-miR-1247-3p mature miRNA
• Sequence: 48 - CGGGAACGUCGGGACUGGAGC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026