Stem-loop bta-mir-378c

Accession

MI0022299

Description

Bos taurus bta-mir-378c precursor miRNA

Literature search

24 open access papers mention bta-mir-378c
(103 sentences)

Sequence

149070 reads, 638 reads per million, 70 experiments

caaaaccaccACUGGACUUGGAGUCAGAAGUuccaugugugagucuugguagggccaguggauugcuaa
........((((((((((.(((.(((.(.........).))).))).)))....)))))))........

Structure

caaaacca       ----   U   G   G AGU 
        ccACUGG    ACU GGA UCA A   u
        |||||||    ||| ||| ||| |   c
        ggugacc    ugg ucu agu u   c
aaucguua       ggga   u   g   g gua 

Annotation confidence Not enough data

Genome context

chr24: 31823795-31823863 [-]

Mature bta-miR-378c

• Accession: MIMAT0025551
• Description: Bos taurus bta-miR-378c mature miRNA
• Sequence: 11 - ACUGGACUUGGAGUCAGAAGU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026