miRBase entry: bta-mir-6530

Stem-loop bta-mir-6530


Accession
MI0022330
Description
Bos taurus bta-mir-6530 precursor miRNA


Sequence

7 reads, 3 reads per million, 7 experiments
agauggacacCGCGGAGGAAGGUAAGACGGcagcgcccgcgcccugugcuugcggcucccgcggucgggucgggcc
.....((((((((((((....(((((((((..(((....))).)))).)))))..)).)))))))...))).....

Structure
agaug   ---       -  GAAG     -    ca   c 
     gac   acCGCGG AG    GUAAG ACGG  gcg c
     |||   ||||||| ||    ||||| ||||  |||  
     cug   uggcgcc uc    cguuc uguc  cgc c
ccggg   ggc       c  --gg     g    -c   g 


Annotation confidence Not enough data
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Genome context
chr20: 63230045-63230120 [-]

Database links

Mature bta-miR-6530

Accession MIMAT0025566
Description Bos taurus bta-miR-6530 mature miRNA
Sequence 11 - CGCGGAGGAAGGUAAGACGG - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026