miRBase entry: gga-mir-6585

Stem-loop gga-mir-6585


Accession
MI0022405
Description
Gallus gallus gga-mir-6585 precursor miRNA


Sequence

2 reads, 1 reads per million, 2 experiments
uacugaaaaugaagacaggAAUCAGAACGUGCUGUGAGCUacuuugcaugugagcuaccuguuuauuuugcuguagugaggagcuuauuuuggagcacguauugguucau
..(((..........)))(((((((.((((((((((((((.(((((((.((((((.....))))))..)))......))))))))))).....))))))).)))))))..

Structure
uacugaaaaugaagacag       A       -----       a    ------   -u      u 
                  gAAUCAG ACGUGCU     GUGAGCU cuuu      gca  gugagc a
                  ||||||| |||||||     ||||||| ||||      |||  |||||| c
                  cuugguu ugcacga     uauucga ggag      cgu  uauuug c
----------------ua       a       gguuu       -    ugaugu   uu      u 


Annotation confidence Not enough data
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Genome context
chr19: 5039446-5039555 [+]

Database links

Mature gga-miR-6585-5p

Accession MIMAT0025676
Description Gallus gallus gga-miR-6585-5p mature miRNA
Sequence 20 - AAUCAGAACGUGCUGUGAGCU - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227