miRBase entry: gga-mir-6595

Stem-loop gga-mir-6595


Accession
MI0022415
Description
Gallus gallus gga-mir-6595 precursor miRNA


Sequence

aaugaguauggccugagcguuuccgaUGAGAUGAUGAAUCCUUUCUGAUCAaagugaauggaaggauucaauuauuuuggauucugaugcguuucagacugagucuagag
...((.(..((.((((((((.((.(((((((((((((((((((((...(((...)))..)))))))))).)))))))))...)).)).))).))))).)).).)).....

Structure
--aau  g au  c     -   u  c  ---         -          UGA   a 
     ga u  gg cugag cgu uc ga   UGAGAUGAU GAAUCCUUUC   UCA  
     || |  || ||||| ||| || ||   ||||||||| ||||||||||   ||| a
     cu a  uc gacuu gcg ag cu   guuuuauua cuuaggaagg   agu  
gagau  g -g  a     u   u  u  uag         a          -ua   g 


Annotation confidence Not enough data
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Genome context
chr11: 13466650-13466759 [-]

Database links

Mature gga-miR-6595-5p

Accession MIMAT0025689
Description Gallus gallus gga-miR-6595-5p mature miRNA
Sequence 27 - UGAGAUGAUGAAUCCUUUCUGAUCA - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227