miRBase entry: mmu-mir-6970

Stem-loop mmu-mir-6970


Accession
MI0022818
Symbol
MGI: Mir6970
Description
Mus musculus mmu-mir-6970 precursor miRNA

Literature search
1 open access papers mention mmu-mir-6970
(2 sentences)

Sequence

290 reads, 20 reads per million, 59 experiments
GUAAGUUCAGGGCUGGGAGCAGAGAcugggccugugcgaggucUCACGCCACCCACCCUGUGCUcag
...(((.(((((.((((.((.((((((..((....))..))))))..))..))))))))).)))...

Structure
GUA   U     C    -A  -A      gg  c 
   AGU CAGGG UGGG  GC  GAGAcu  gc u
   ||| ||||| ||||  ||  ||||||  ||  
   UCG GUCCC ACCC  CG  CUcugg  cg g
gac   U     -    AC  CA      ag  u 


Annotation confidence High
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Genome context
chr17: 34845101-34845167 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-6970
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-6970-5p

Accession MIMAT0027842
Description Mus musculus mmu-miR-6970-5p mature miRNA
Sequence 1 - GUAAGUUCAGGGCUGGGAGCAGAGA - 25
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6970-3p

Accession MIMAT0027843
Description Mus musculus mmu-miR-6970-3p mature miRNA
Sequence 44 - UCACGCCACCCACCCUGUGCU - 64
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645