Stem-loop mdm-MIR156a

Accession

MI0022971

Description

Malus domestica mdm-MIR156a precursor miRNA

Gene family

MIPF0000008; MIR156

Literature search

15 open access papers mention mdm-MIR156a
(313 sentences)

Sequence

aguUGACAGAAGAGAGUGAGCACacacaggcggyaauuguauaaaaucauacyuuugggcggugcgugcucacuucucucuccgucagcu
(((((((.(((((((((((((((.(((..((.......((((......))))......)).))).)))))))).))))).)).)))))))

Structure

       A  -     -        a   ag  ggyaauu    aa 
aguUGAC GA AGAGA GUGAGCAC cac  gc       guau  a
||||||| || ||||| |||||||| |||  ||       ||||   
ucgacug cu ucucu cacucgug gug  cg       caua  a
       c  c     u        c   -g  -gguuuy    cu 

Annotation confidence Not enough data

Genome context

MDC010428.317: 6230-6319 [+]

Mature mdm-miR156a

• Accession: MIMAT0025867
• Description: Malus domestica mdm-miR156a mature miRNA
• Sequence: 4 - UGACAGAAGAGAGUGAGCAC - 23
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47