miRBase entry: mdm-MIR156d

Stem-loop mdm-MIR156d


Accession
MI0022974
Description
Malus domestica mdm-MIR156d precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
14 open access papers mention mdm-MIR156d
(301 sentences)

Sequence

uggacuaguagcgagugguggUGACAGAAGAGAGUGAGCACacucgggcaauuguauaaagccauaccuuugcgugaugugugcucacuucucuuucugucagccgcacgccgcccyccgccca
(((.......(((.((((((((((((((((((((((((((((((((.((((..((((......))))..)))).))).)))))))))).)))).)))))))).)))).)))))).......)))

Structure
   acuagua   a   -    -        -    -          -   g    uu    aa 
ugg       gcg gug gugg UGACAGAA GAGA GUGAGCACac ucg gcaa  guau  a
|||       ||| ||| |||| |||||||| |||| |||||||||| ||| ||||  ||||   
acc       cgc cgc cgcc acugucuu cucu cacucgugug agu cguu  caua  g
   cgccycc   -   a    g        u    u          u   g    uc    cc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mdm-miR156d

Accession MIMAT0025870
Description Malus domestica mdm-miR156d mature miRNA
Sequence 22 - UGACAGAAGAGAGUGAGCAC - 41
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47