miRBase entry: mdm-MIR156i

Stem-loop mdm-MIR156i


Accession
MI0022979
Description
Malus domestica mdm-MIR156i precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
14 open access papers mention mdm-MIR156i
(299 sentences)

Sequence

ggUGACAGAAGAGAGUGAGCACacaugguauuuuruugcaugcuggguucaugcucgaagcuuugcgugcuuaaucucuaucugucgcc
((((((((((((((.(((((((.((.(((.(((....(((((.......)))))..)))))).)).))))))).))))).)))))))))

Structure
         -     G       a  u   a   uruu     cu 
ggUGACAGA AGAGA UGAGCAC ca ggu uuu    gcaug  g
||||||||| ||||| ||||||| || ||| |||    |||||  g
ccgcugucu ucucu auucgug gu ucg aag    cguac  g
         a     a       c  u   -   --cu     uu 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature mdm-miR156i

Accession MIMAT0025875
Description Malus domestica mdm-miR156i mature miRNA
Sequence 3 - UGACAGAAGAGAGUGAGCAC - 22
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47