miRBase entry: mdm-MIR156n

Stem-loop mdm-MIR156n


Accession
MI0022984
Description
Malus domestica mdm-MIR156n precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
14 open access papers mention mdm-MIR156n
(299 sentences)

Sequence

uuaaucugguuggacuuaggguagaaauUGACAGAAGAGAGUGAGCACacagaggcacuugccauaaagcguaugccauugcuuuugcgugcucaugucucuuucugucagcuuccccauuuccacugccggauuaa
.(((((((((((((..(.(((..(((.(((((((((((((((((((((.((((((((..((.((((.....)))).)).)))))))).)))))))).)))).))))))))).)))))))..))))..))))))))).

Structure
u         --    cu a   ua   a         -    -        a        cu  c    a 
 uaaucuggu  ugga  u ggg  gaa uUGACAGAA GAGA GUGAGCAC cagaggca  ug caua a
 |||||||||  ||||  | |||  ||| ||||||||| |||| |||||||| ||||||||  || |||| g
 auuaggccg  accu  a ccc  cuu gacugucuu cucu uacucgug guuuucgu  ac guau c
a         uc    uu -   --   c         u    g        c        -u  c    g 


Annotation confidence Not enough data
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Genome context
MDC022241.434: 30158-30294 [-]

Database links

Mature mdm-miR156n

Accession MIMAT0025880
Description Malus domestica mdm-miR156n mature miRNA
Sequence 29 - UGACAGAAGAGAGUGAGCAC - 48
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47