miRBase entry: mdm-MIR156r

Stem-loop mdm-MIR156r


Accession
MI0022988
Description
Malus domestica mdm-MIR156r precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
14 open access papers mention mdm-MIR156r
(299 sentences)

Sequence

ugaauuugCUGACAGAAGAUAGAGAGCACagaugaggaaaugcaaaaacaaggcagcaucuccauccuuugugcucucuauucuucugucaacaccuuca
((((..((.(((((((((((((((((((((((.(((((.((((............)))).))).)).))))))))))))).)))))))))).))..))))

Structure
    uu  C          -             u  -   a    aaaaa 
ugaa  ug UGACAGAAGA UAGAGAGCACaga ga gga augc     c
||||  || |||||||||| ||||||||||||| || ||| ||||      
acuu  ac acugucuucu aucucucguguuu cu ccu uacg     a
    cc  a          u             c  a   c    acgga 


Annotation confidence Not enough data
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Genome context
MDC012217.482: 9920-10019 [+]

Database links

Mature mdm-miR156r

Accession MIMAT0025884
Description Malus domestica mdm-miR156r mature miRNA
Sequence 9 - CUGACAGAAGAUAGAGAGCAC - 29
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47