Stem-loop mdm-MIR160a

Accession

MI0023004

Description

Malus domestica mdm-MIR160a precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

8 open access papers mention mdm-MIR160a
(38 sentences)

Sequence

uaUGCCUGGCUCCCUGUAUGCCAcaagcagaaguucaauuucuugauuggcuauuguggguggcguacaaggagccaagcaua
(((((.(((((((.((((((((((..((((.(((.(((((....)))))))).))))..)))))))))).))))))).)))))

Structure

     C       C          aa    a   u     u 
uaUGC UGGCUCC UGUAUGCCAc  gcag agu caauu c
||||| ||||||| ||||||||||  |||| ||| |||||  
auacg accgagg acaugcggug  uguu ucg guuag u
     a       a          gg    a   -     u 

Annotation confidence Not enough data

Genome context

MDC022902.474: 1630-1712 [+]

Mature mdm-miR160a

• Accession: MIMAT0025900
• Description: Malus domestica mdm-miR160a mature miRNA
• Sequence: 3 - UGCCUGGCUCCCUGUAUGCCA - 23
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47