Stem-loop mdm-MIR160b

Accession

MI0023005

Description

Malus domestica mdm-MIR160b precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

8 open access papers mention mdm-MIR160b
(38 sentences)

Sequence

uuaUGCCUGGCUCCCUGUAUGCCAcaagcagaaguucaaucuguuucucgauuggcuauugcggguggcguaugaggagucaagcauag
.(((((.(((((((.((((((((((..((((.(((.(((((........)))))))).))))..)))))))))).))))))).))))).

Structure

u     C       C          aa    a   u     ugu 
 uaUGC UGGCUCC UGUAUGCCAc  gcag agu caauc   u
 ||||| ||||||| ||||||||||  |||| ||| |||||    
 auacg acugagg guaugcggug  cguu ucg guuag   u
g     a       a          gg    a   -     cuc 

Annotation confidence Not enough data

Genome context

MDC001923.221: 16751-16839 [+]

Mature mdm-miR160b

• Accession: MIMAT0025901
• Description: Malus domestica mdm-miR160b mature miRNA
• Sequence: 4 - UGCCUGGCUCCCUGUAUGCCA - 24
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47