miRBase entry: mdm-MIR160c

Stem-loop mdm-MIR160c


Accession
MI0023006
Description
Malus domestica mdm-MIR160c precursor miRNA
Gene family
MIPF0000032; MIR160

Literature search
8 open access papers mention mdm-MIR160c
(38 sentences)

Sequence

uaugUGCCUGGCUCCCUGUAUGCCAuuugcagagucccaccgaacagcgauggccucuguggauggcguaugaggagccaagcauaua
(((((((.(((((((.((((((((((((((((((..(((.((.....)).))).)))))))))))))))))).))))))).)))))))

Structure
       C       C                  uc   c  a 
uaugUGC UGGCUCC UGUAUGCCAuuugcagag  cca cg a
||||||| ||||||| ||||||||||||||||||  ||| || c
auauacg accgagg guaugcgguaggugucuc  ggu gc a
       a       a                  -c   a  g 


Annotation confidence Not enough data
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Genome context
MDC002994.270: 8251-8338 [+]

Database links

Mature mdm-miR160c

Accession MIMAT0025902
Description Malus domestica mdm-miR160c mature miRNA
Sequence 5 - UGCCUGGCUCCCUGUAUGCCA - 25
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47