miRBase entry: mdm-MIR164b

Stem-loop mdm-MIR164b


Accession
MI0023012
Description
Malus domestica mdm-MIR164b precursor miRNA
Gene family
MIPF0000045; MIR164

Literature search
8 open access papers mention mdm-MIR164b
(39 sentences)

Sequence

gggugaguaguucguguUGGAGAAGCAGGGCACGUGCAaauucuagcucgagcaauccuucaucaggagcuuaaaaacuuugcacuugcucrccuucuccaacacaagcuucucaccu
(((((((.((((.((((((((((((..(((((.(((((((((..(((((.................)))))..))...))))))).)))))..)))))))))))).)))).)))))))

Structure
       u    c            CA     C       ---  cu     gagcaau 
gggugag aguu guguUGGAGAAG  GGGCA GUGCAaa   uu  agcuc       c
||||||| |||| ||||||||||||  ||||| |||||||   ||  |||||       c
uccacuc ucga cacaaccucuuc  cucgu cacguuu   aa  ucgag       u
       u    a            cr     u       caa  au     gacuacu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mdm-miR164b

Accession MIMAT0025908
Description Malus domestica mdm-miR164b mature miRNA
Sequence 18 - UGGAGAAGCAGGGCACGUGCA - 38
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47