Stem-loop mdm-MIR167c

Accession

MI0023028

Description

Malus domestica mdm-MIR167c precursor miRNA

Gene family

MIPF0000023; MIR167_1

Literature search

11 open access papers mention mdm-MIR167c
(204 sentences)

Sequence

uagcaguUGAAGCUGCCAGCAUGAUCUAaacuucccucuuggucaaggaaagaucagaucaugugguagcuucaccuguug
((((((.(((((((((((.((((((((...(((.(((........))).)))...))))))))))))))))))).))))))

Structure

      u           G        Aaa   c   cuu 
uagcag UGAAGCUGCCA CAUGAUCU   cuu ccu   g
|||||| ||||||||||| ||||||||   ||| |||    
guuguc acuucgauggu guacuaga   gaa gga   g
      c           -        cua   a   acu 

Annotation confidence Not enough data

Genome context

MDC000702.551: 40612-40692 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdm-MIR167c

Mature mdm-miR167c

• Accession: MIMAT0025924
• Description: Malus domestica mdm-miR167c mature miRNA
• Sequence: 8 - UGAAGCUGCCAGCAUGAUCUA - 28
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47