Stem-loop mdm-MIR171a

Accession

MI0023042

Description

Malus domestica mdm-MIR171a precursor miRNA

Literature search

9 open access papers mention mdm-MIR171a
(40 sentences)

Sequence

gaagguauugacgcgccucaauuugaacgrguggcuyauauuggagacuuaaccaugcgauucugaUUGAGCCGCGUCAAUAUCUCC
..(((((((((((((.(((((((.(((((.((((..................)))).)).))).))))))).)))))))))))))..

Structure

ga             c       u   -  r    cuyauauu 
  agguauugacgcg cucaauu gaa cg gugg        g
  ||||||||||||| ||||||| ||| || ||||         
  UCUAUAACUGCGC GAGUUag cuu gc uacc        g
CC             C       u   a  g    aauucaga 

Annotation confidence Not enough data

Genome context

Unknown

Mature mdm-miR171a

• Accession: MIMAT0025938
• Description: Malus domestica mdm-miR171a mature miRNA
• Sequence: 67 - UUGAGCCGCGUCAAUAUCUCC - 87
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47