Stem-loop mdm-MIR172a

Accession

MI0023056

Description

Malus domestica mdm-MIR172a precursor miRNA

Gene family

MIPF0000035; MIR172

Literature search

14 open access papers mention mdm-MIR172a
(78 sentences)

Sequence

ggucacuuuuugcggguggagcaucaucaygauucacaaucuuacuugguucuaguuuaaccccauuugaugauaugAGAAUCUUGAUGAUGCUGCAgcagcaauaaugacu
(((((.((.((((.(.((.((((((((((.(((((.((((((((..(((.............)))..))).))).)).))))).)))))))))).)).).)))).)))))))

Structure

     c  u    g g  g          y     a  -   -   cu   uucua 
gguca uu uugc g ug agcaucauca gauuc ca auc uua  ugg     g
||||| || |||| | || |||||||||| ||||| || ||| |||  |||     u
ucagu aa aacg c AC UCGUAGUAGU CUAAG gu uag agu  acc     u
     -  u    a g  G          U     A  a   u   uu   ccaau 

Annotation confidence Not enough data

Genome context

Unknown

Mature mdm-miR172a

• Accession: MIMAT0025952
• Description: Malus domestica mdm-miR172a mature miRNA
• Sequence: 78 - AGAAUCUUGAUGAUGCUGCA - 97
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47