miRBase entry: mdm-MIR172g

Stem-loop mdm-MIR172g


Accession
MI0023062
Description
Malus domestica mdm-MIR172g precursor miRNA
Gene family
MIPF0000035; MIR172

Literature search
14 open access papers mention mdm-MIR172g
(81 sentences)

Sequence

gucguuguuugcggguguggcaucaucaagauucacacaugcaauuaacugauaaaguuguuugaaagugAGAAUCUUGAUGAUGCUGCAUcggcaauaaaccac
...(((..((((.(((((((((((((((((((((.(((...(((.(((((.....))))).)))...))).))))))))))))))))))))).))))..)))...

Structure
guc   gu    g                     a   aug   u     g 
   guu  uugc gguguggcaucaucaagauuc cac   caa uaacu a
   |||  |||| ||||||||||||||||||||| |||   ||| ||||| u
   caa  aacg cUACGUCGUAGUAGUUCUAAG gug   guu guuga a
cac   au    g                     A   aaa   u     a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MDC007034.256: 4273-4377 [-]

Database links

Mature mdm-miR172g

Accession MIMAT0025958
Description Malus domestica mdm-miR172g mature miRNA
Sequence 71 - AGAAUCUUGAUGAUGCUGCAU - 91
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47