Stem-loop mdm-MIR393a

Accession

MI0023079

Description

Malus domestica mdm-MIR393a precursor miRNA

Gene family

MIPF0000083; MIR393

Literature search

6 open access papers mention mdm-MIR393a
(31 sentences)

Sequence

guggaggcuUCCAAAGGGAUCGCAUUGAUCUaauugaucauauaugucaaacaucguccguacagacauggcagguuauauauguaguuggaucaugcgaucccuucggacguuuccau
((((((((.(((.((((((((((((.((((((((((..((((((((.....(((.(((......))))))......)))))))))))))))))))))))))))))).))).))))))))

Structure

        u   A            U          au        -ucaaa   c   cg 
guggaggc UCC AAGGGAUCGCAU GAUCUaauug  cauauaug      cau guc  u
|||||||| ||| |||||||||||| ||||||||||  ||||||||      ||| |||   
uaccuuug agg uucccuagcgua cuagguugau  guauauau      gua cag  a
        c   c            -          --        uggacg   -   ac 

Annotation confidence Not enough data

Genome context

MDC019461.80: 14961-15079 [+]

Mature mdm-miR393a

• Accession: MIMAT0025975
• Description: Malus domestica mdm-miR393a mature miRNA
• Sequence: 10 - UCCAAAGGGAUCGCAUUGAUCU - 31
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47