miRBase entry: mdm-MIR396e

Stem-loop mdm-MIR396e


Accession
MI0023097
Description
Malus domestica mdm-MIR396e precursor miRNA
Gene family
MIPF0000047; MIR396

Literature search
9 open access papers mention mdm-MIR396e
(40 sentences)

Sequence

uugccaugcuuUUCCACAGCUUUCUUGAACUUcaauucucugcugucuaaaukucuuucaggacuagcaccauggaagcucaagaaagcugugggagaccauggcaa
.(((((((.(((((((((((((((((((.((((.......((((((((............)))).)))).....)))).))))))))))))))))))).))))))).

Structure
u       c                   A    aauucuc    -    aaauk 
 ugccaug uuUUCCACAGCUUUCUUGA CUUc       ugcu gucu     u
 ||||||| ||||||||||||||||||| ||||       |||| ||||      
 acgguac agagggugucgaaagaacu gaag       acga cagg     c
a       c                   c    --guacc    u    acuuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mdm-miR396e

Accession MIMAT0025993
Description Malus domestica mdm-miR396e mature miRNA
Sequence 12 - UUCCACAGCUUUCUUGAACUU - 32
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47