Stem-loop mdm-MIR3627a

Accession

MI0023120

Description

Malus domestica mdm-MIR3627a precursor miRNA

Gene family

MIPF0001471; MIR3627

Literature search

4 open access papers mention mdm-MIR3627a
(9 sentences)

Sequence

ggauuuauguUCGCAGGAGAGAUGGCACUAauugugccacaauugucaauaauuguugccaucucuucugugaccaaaaagaucu
((((((.((.(((((((((((((((((.(((((((...((....))..))))))).))))))))))))))))).))...))))))

Structure

      --a  u                 C       gcc  a 
ggauuu   ug UCGCAGGAGAGAUGGCA UAauugu   ac a
||||||   || ||||||||||||||||| |||||||   ||  
ucuaga   ac agugucuucucuaccgu guuaaua   ug u
      aaa  c                 u       -ac  u 

Annotation confidence Not enough data

Genome context

MDC007724.222: 3945-4029 [-]

Mature mdm-miR3627a

• Accession: MIMAT0026016
• Description: Malus domestica mdm-miR3627a mature miRNA
• Sequence: 11 - UCGCAGGAGAGAUGGCACUA - 30
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47