Stem-loop mdm-MIR3627b

Accession

MI0023121

Description

Malus domestica mdm-MIR3627b precursor miRNA

Gene family

MIPF0001471; MIR3627

Literature search

4 open access papers mention mdm-MIR3627b
(9 sentences)

Sequence

ggagauuuauguUCGCAGGAGAGAUGGCACUAauugugcuacaacuacaagcaauuguugccaucuuucccgugaccaaaaagcucu
((((.(((.((.((((.((((((((((((.(((((((.............))))))).)))))))))))).)))).)).))).))))

Structure

    a   a  u    A            C       gcuac 
ggag uuu ug UCGC GGAGAGAUGGCA UAauugu     a
|||| ||| || |||| |||||||||||| |||||||     a
ucuc aaa ac agug ccuuucuaccgu guuaacg     c
    g   a  c    c            u       aacau 

Annotation confidence Not enough data

Genome context

MDC010881.251: 3172-3258 [+]

Mature mdm-miR3627b

• Accession: MIMAT0026017
• Description: Malus domestica mdm-miR3627b mature miRNA
• Sequence: 13 - UCGCAGGAGAGAUGGCACUA - 32
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47