miRBase entry: mdm-MIR482d

Stem-loop mdm-MIR482d


Accession
MI0023143
Description
Malus domestica mdm-MIR482d precursor miRNA
Gene family
MIPF0000403; MIR482

Literature search
4 open access papers mention mdm-MIR482d
(9 sentences)

Sequence

aggaaguuguuggAAUGGAAGGGUAGGAAAGAAGaaacuucucuuguauguuccaaauucaagagauaaaauuucuuuccuaucccucccauuccuuckauuuucu
(((((((.(..(((((((.(((((((((((((((.....(((((((.((.......)).))))))).....))))))))))).)))).)))))))..).)))))))

Structure
       u uu       A    -           aaacu       u  gu 
aggaagu g  ggAAUGG AGGG UAGGAAAGAAG     ucucuug au  u
||||||| |  ||||||| |||| |||||||||||     ||||||| ||  c
ucuuuua c  ccuuacc uccc auccuuucuuu     agagaac ua  c
       k uu       c    u           aaaau       u  aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature mdm-miR482d

Accession MIMAT0026039
Description Malus domestica mdm-miR482d mature miRNA
Sequence 14 - AAUGGAAGGGUAGGAAAGAAG - 34
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47