miRBase entry: mdm-MIR7121g

Stem-loop mdm-MIR7121g


Accession
MI0023150
Description
Malus domestica mdm-MIR7121g precursor miRNA
Gene family
MIPF0001376; MIR7121

Literature search
1 open access papers mention mdm-MIR7121g
(1 sentences)

Sequence

uauuacccuccUCCUCUUGGUGAUCGCCCUGCcccauauggucuucugaauucagggccugcauaucgacagggugguuaccaaugggaugacgguaaua
(((((((.((.((((.((((((((((((((((...(((((...(((((....)))))....))))).).))))))))))))))).)))).)).)))))))

Structure
       c  c    C               - ccc     -guc     a 
uauuacc uc UCCU UUGGUGAUCGCCCUG C   auaug    uucug a
||||||| || |||| ||||||||||||||| |   |||||    |||||  
auaaugg ag aggg aaccauuggugggac g   uauac    gggac u
       c  u    u               a --c     gucc     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
MDC009272.679: 779-878 [-]

Database links

Mature mdm-miR7121g

Accession MIMAT0026046
Description Malus domestica mdm-miR7121g mature miRNA
Sequence 12 - UCCUCUUGGUGAUCGCCCUGC - 32
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22704043
    Apple miRNAs and tasiRNAs with novel regulatory networks
    Xia R, Zhu H, An YQ, Beers EP, Liu Z
    Genome Biol (2012) 13:R47