Stem-loop sequence bma-mir-5857

Accession MI0023456
Description Brugia malayi miR-5857 stem-loop
Stem-loop 
acuu uu  -       uu     uu g u        uu 
    g  ag gaaguuu  uggga  u c gaggagga  c
    |  || |||||||  |||||  | | ||||||||  g
    c  uc cuucaag  acccu  a g cuccucuu  a
guug uc  u       cc     -u g c        ca
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Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Mature sequence bma-miR-5857

Accession MIMAT0026356
Sequence

11 -  

aaguuuuuugggauuugcugagga

 - 34

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Evidence not experimental

References

1
PMID:22216965 "Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel" Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C BMC Genomics. 13:4(2012).