miRBase entry: gga-mir-1467-2

Stem-loop gga-mir-1467-2


Accession
MI0023550
Description
Gallus gallus gga-mir-1467-2 precursor miRNA
Gene family
MIPF0001416; mir-1467

Literature search
1 open access papers mention gga-mir-1467-2
(1 sentences)

Sequence

87 reads, 2 reads per million, 4 experiments
gggacaggacagguuguuuUCUCAGCUACAUCGGUGUAAAUCcagggcaauucuacugagguUCACACCAGAGUAACUGGGAUCagaaucuggccaccaucguccaccug
.((((.((.((((((.(..((((((.(((.(((((((.(((((((..........))).)))).))))).))))).))))))..).)))))).))......)))).....

Structure
----g    -----a  a      g uu      C   A  -     A    -   ggca 
     ggac      gg cagguu u  UCUCAG UAC UC GGUGU AAUC cag    a
     ||||      || |||||| |  |||||| ||| || ||||| |||| |||     
     ccug      cc gucuaa a  AGGGUC AUG AG CCACA Uugg guc    u
gucca    cuacca  g      g CU      A   -  A     C    a   aucu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature gga-miR-1467-5p

Accession MIMAT0007345
Description Gallus gallus gga-miR-1467-5p mature miRNA
Sequence 20 - UCUCAGCUACAUCGGUGUAAAUC - 42
Evidence experimental
Illumina [2]

Mature gga-miR-1467-3p

Accession MIMAT0007346
Description Gallus gallus gga-miR-1467-3p mature miRNA
Sequence 63 - UCACACCAGAGUAACUGGGAUC - 84
Evidence experimental
454 [1], Northern [1], Illumina [2]

References

  1. PubMed ID: 18469162
    A microRNA catalog of the developing chicken embryo identified by a deep sequencing approach
    "Glazov EA, Cottee PA, Barris WC, Moore RJ, Dalrymple BP, Tizard ML"
    "Genome Res (2008) 18:957-964

  2. PubMed ID: 18430245
    Deep sequencing of chicken microRNAs
    Burnside J, Ouyang M, Anderson A, Bernberg E, Lu C, Meyers BC, Green PJ, Markis M, Isaacs G, Huang E, Morgan RW
    BMC Genomics (2008) 9:185